Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFGKSSNDTQENPKDALKSTNFHEKHTKPTETTELVEENKALTTEKERLERENKNLTADKENLTKEKTELQKQVNELKNSKQVLENEKADWLREKENLTKDRE-----NLTKEKTELTEKNKVLTTEKERLATEKENLTKEKTESQKQVNELKNSKQVLENEKADLTNENTKLKTDKTDLTEKNQRLTTEKTELNNKITGLATEKERLAADKENLTKESRQRKPN |
4HSE Chain:A ((264-366)) | ------------------------------------EEIDALERKKLQLEIEREAL-------SQER--LKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSR------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 56276 for 460 contacts (122.3/contact) +
2D Compatibility (PS) -10389 + (NN) -9323 + (LL) 5384
1D Compatibility (HY) -2000 + (ID) 1450
Total energy: 38498.0 ( 83.69 by residue)
QMean score : 0.500
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