Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVQMDTEEVREFVGHLERFKELLNEEVNSLNGHFHNLES-WQDARRDKFSEVLDNLKGTFNEFNEAAQEQIAWLKERIRVLEEDY
4J42 Chain:A ((8-72))
----KITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKF-------RGEFIQSKQAMQQFIPILEGISTDLKRIA
General information:
TITO was launched using:
RESULT:
Template:
4J42.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5129 for 286 contacts (-17.9/contact) +
2D Compatibility (PS) -6616 + (NN) -1875 + (LL) 936
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -17184.0 ( -60.08 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_4J42.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J42-query.scw
PDB file :
Tito_Scwrl_4J42.pdb
: