Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTAKVNDIVRDWVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKTPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHPHTAQTSKKDAK
4UY8 Chain:J ((3-138))
-TFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
General information:
TITO was launched using:
RESULT:
Template:
4UY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52843 for 935 contacts (-56.5/contact) +
2D Compatibility (PS) -15189 + (NN) -9474 + (LL) 208
1D Compatibility (HY) -10000 + (ID) 3400
Total energy: -90698.0 ( -97.00 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_4UY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UY8-query.scw
PDB file :
Tito_Scwrl_4UY8.pdb
: