Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNTTWSPTSWHSFKIEQHPTYKDEQELERVKKELRSYPPLVFAGEARNLQERLAQVIDNKAFLLQGGDCAESFSQFSANRIRDMFKVMMQMAIVLTFAGSIPIVKVGRIAGQFAKPRSNATEILDDEEVLSYRGDIINGISKKE--REPKPERMLKAYHQSVATLNLIRAFAQGGLADLEQVHRFNLDFVKNNDFGQKYQQIADRITQALGFMRACGVEIERTPILREVEFYTSHEALLLHYEEPLVR---KDSLTNQFYDCSAHMLWIGERTRDPKGAHVEFLRGVCNPIGVKIGPNASVSEVLELCDVLNPHNLKGRLNLIVRMGSKIIKERLPKLLQGVLKEKRHILWSIDPMHGNTVKTNLGVKTRAFDSVLDEVKSFFEIHRAEGSLASGVHLEMTGENVTECIGGSQAITEEGLSCHYYTQCDPRLNATQALELAFLIADMLKKQRT |
3PFP Chain:A ((38-463)) | -----------------QQPTWPADQALA-MRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGGDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADIDALG---LRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWNREFVRTSPAGARYEALATEIDRGLRFMSACGVA-DRN--LQTAEIYASHEALVLDYERAMLRLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNMTPELAVEYVERLDPHNKPGRLTLVSRMGNHKVRDLLPPIVEKVQATGHQVIWQCDPMHGNTHESSTGFKTRHFDRIVDEVQGFFEVHRALGTHPGGIHVEITGENVTECLGGAQDISETDLAGRYETACDPRLNTQQSLELAFLVAEMLRD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197465 for 3727 contacts (-53.0/contact) +
2D Compatibility (PS) -45869 + (NN) -25468 + (LL) 1676
1D Compatibility (HY) -38000 + (ID) 10150
Total energy: -315276.0 ( -84.59 by residue)
QMean score : 0.566
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