Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKYHSDQEYEEIITDQLGDMQLRENLRSAMDTLRANRKNLLKNRYSEWENLRELGKEVKLKILSRLDEYLELFEKNATQNGFKIHYAKDGDEANEIIYNLAKEKNIKRILKQKSMASEEIGLNHYLKEKGIQAQETDLGELIIQLINEHPVHIVVPAIHKNRKQIGKIFEEKLNAAYEEEPEKLNAIARKHMRKEFESFKMGISGVNFAIANEGAIWLVENEGNGRMSTTACDVHVAICGIEKLVESFDDAAILNNLLAPSAVGVPITCYQNIITGPRKNDDLDGPKETHIILLDNNRSNILADEKYYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVS-------------PQLFGLNNYGHIPNLCSLCGRCTEVCPVEIPLAELIRDLRSDKVGEGRGVVKGAKSTQHSGMEKFSMKMFAKMASDGTKWRFQLKMAQFFSPLGKLLAPILPLVKEWASVRTLPNMDTSLHAKVQHLEGVIYE |
1L0V Chain:B ((141-225)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KYHQFSGCINCGLCYAACPQF------GLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWS-CTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIATLKPR------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77999 for 511 contacts (-152.6/contact) +
2D Compatibility (PS) -7126 + (NN) 367 + (LL) 27248
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -63410.0 ( -124.09 by residue)
QMean score : 0.419
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