Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKNFWPLGIMSVLIFGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAMLKTYENFKSNYRFSVGLKPLTESPKTPILPYFSKGTHGDKKIQENLLNNALILEKSNTLYAQLQPLKPALDSPNIQVYLAFYPSQSQPRLLGTLDCKNACEPLKFDLLEGDKVGRYKILFKFVFKNKEELILEQLAFFK |
| 3WBH Chain:A ((403-474)) | -------------------------------------------------------------------------LEEEQRTPARLMEMVNANSDFQIDEEQAE-AVLADKPNPYHVEGHSYLEAEEVPAIQDFDAFYPYNDRGNVLGRVLGTAQNVVWGTGTHTHTPVNVFAWGPAETILPVSSIQHHSEVGQY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WBH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214 for 413 contacts (-0.5/contact) +
2D Compatibility (PS) -7270 + (NN) -3055 + (LL) 4888
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -7451.0 ( -18.04 by residue)
QMean score : 0.002
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