Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTENTDETHLRETKNKLGRKPKADANKKTRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEQGGGFIAFNLFLI
2K1O Chain:A ((21-63))
----------------------------KRNFSVTFYLSKEEHDVLRRLADEEVESVNSFVKRHILKTIIYKKGTNQDSSIN----
General information:
TITO was launched using:
RESULT:
Template:
2K1O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5650 for 192 contacts (-29.4/contact) +
2D Compatibility (PS) -4611 + (NN) -1813 + (LL) 1536
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -15438.0 ( -80.41 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_2K1O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K1O-query.scw
PDB file :
Tito_Scwrl_2K1O.pdb
: