Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKLVIGSRGSELALWQANHIKERLKKECS-MESEIRIVKTTGDKILDAPLNKIGGKGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFL-SVKF--PDLMSLPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKL-ECGEFDAIILAEAGLCRLNVQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITLQK-LNNEESAFCCHLEREFIKGLNGGCQIPIGVHANLMGDEVKIRAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQSGAKEILEKAQLF |
3EQ1 Chain:A ((19-271)) | -RVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIA---------------------FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHN-RVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHVPQHEDDPQLVGITARNIPRGPQLAAQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92982 for 1746 contacts (-53.3/contact) +
2D Compatibility (PS) -24263 + (NN) -11490 + (LL) 924
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -150761.0 ( -86.35 by residue)
QMean score : 0.456
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