Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEERFESFAKALRMDEELQQKIESRKTDIVIQSMANILSGNE
3MLI Chain:D ((3-92))
--DYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALCETFIEKEDLEEKFESFAKALRIDEELQQKIESRKTDIVIQSMANILSGLE
General information:
TITO was launched using:
RESULT:
Template:
3MLI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14161 for 499 contacts (-28.4/contact) +
2D Compatibility (PS) -10185 + (NN) -8880 + (LL) 308
1D Compatibility (HY) -12800 + (ID) 4300
Total energy: -50018.0 ( -100.24 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3MLI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MLI-query.scw
PDB file :
Tito_Scwrl_3MLI.pdb
: