Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADVVVGIQWGDEGKGKIVDRIAKDYDFVVRYQGGHNAGHTIVHKGVKHSLHLMPSGVLYPKCKNIISSAVVVSVKDLCEEIS-----AFEDLENRLFISDRAHVILPYHAKKDAFKE------KSQNIGTTKKGIGPCYEDKMARSGIRMGDLLDDKILEEKLNAHFKAIEPFKKAYDLGENYEKDLMGYFKT---YAPKICPFIKDTTSMLIEA-NQKGEKILLEGAQGTLLDIDLGTYPFVTSSNTTSASACVSTGLNPKAINEVIGITKAYSTRVGNGPFPSEDTTPMGDHLRTKGVEFGTTTKRPRRCGWLDLVALKYACALNGCTQLALMKLDVLDGIDAIKVCVAYERKGERLEAFPSD---LKDCTPIYQTFKGWEK-SVGVRKLDDLEPNAREYIRFIEKEVGVKIGLISTSPEREDTIFL
2DGN Chain:A ((35-456))---VVLGAQWGDEGKGKVVDLLATDADIVSRCQGGNNAGHTVVVDGKEYDFHLLPSGIINTKAVSFIGNGVVIHLPGLFEEAEKNEKKGLKDWEKRLIISDRAHLVFDFHQAVDGLQEVQRQAQEGKNIGTTKKGIGPTYSSKAARTGLRICDLLSDF---DEFSARFKNLA--HQHQSMFPTLEIDVEGQLKRLKGFAERIRPMVRDGVYFMYEALHGPPKKVLVEGANAALLDIDFGTYPFVTSSNCTVGGVCTGLGIPPQNIGDVYGVVKAYTTRVGIGAFPTEQINEIGDLLQNRGHEWGVTTGRKRRCGWLDLMILRYAHMVNGFTALALTKLDILDVLSEIKVGISYKLNGKRIPYFPANQEILQKVEVEYETLPGWKADTTGARKWEDLPPQAQSYVRFVENHMGVAVKWVGVGKSRESMIQL


General information:
TITO was launched using:
RESULT:

Template: 2DGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177070 for 3526 contacts (-50.2/contact) +
2D Compatibility (PS) -42903 + (NN) -7218 + (LL) 752
1D Compatibility (HY) -38000 + (ID) 9350
Total energy: -273789.0 ( -77.65 by residue)
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_2DGN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DGN-query.scw
PDB file : Tito_Scwrl_2DGN.pdb: