Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFASVLVQLKTLALEKIERKLESKRLELQQNEREVLDKQAQLSAFKNPELGGMSLFLQTQQLKSALRMEIEYYQQEGENLTKDLKILEKDYLLANQELEKAKIILEKEKQKEKEILEKKEQALLDENAMILHWQKGGLHA |
3NA7 Chain:A ((88-122)) | -----------------------------------------------------SERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVEKTEPK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1342 for 133 contacts (10.1/contact) +
2D Compatibility (PS) -3850 + (NN) -1679 + (LL) 5148
1D Compatibility (HY) 2800 + (ID) 250
Total energy: 3511.0 ( 26.40 by residue)
QMean score : 0.309
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