Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILEVKDLKTYFFTDKGVNKAVDGVSFGLKKSQTLCIVGESGSGKSITSLSILGLIEK--PGKIVGGSIQFLGQDLLQLKEKQMQKEIRGKKIGMIFQEPMTSLNPSYTVGFQINEV-LKIHHPSLNKKERLERVVYELERVGIPHAGDKYHEYPFNLSGGQRQRVMIAMAMVCEPEILIADEPTTALDVTIQAQILELMKELQQKKGTSILFITHDLGVVAQIADEVVVMYKGHVVEQASAKELFADPRHPYTKALLNAIPKPGKEYRKKRLETVDENVDYLSFQKELR
2OUK Chain:A ((24-262))
-MIDVHQLKKSF----GSLEVLKGINVHIREGEVVVVIGPSGSGKS-TFLRCLNLLEDFDEGEIIIDGIN------LKAKDTNLNK-VR-EEVGMVFQR--FNLFPHMTVLNNITLAPMKVRKWPREKAE--AKAMELLDKVGLK---DKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLAN-EGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136985 for 1934 contacts (-70.8/contact) +
2D Compatibility (PS) -26219 + (NN) -15188 + (LL) 2920
1D Compatibility (HY) -22000 + (ID) 4350
Total energy: -201822.0 ( -104.35 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2OUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OUK-query.scw
PDB file :
Tito_Scwrl_2OUK.pdb
: