Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAHKERLESNLLELLQEALA-SLNDSELNSLSVTKVECSKGKHHALVFV---LS-S---DHKILSKLKKAEGLIRQFVLQASGWFKCPKLSFVLDDSLEKQLRLDAIFNEIAKGKDND
1JOS Chain:A ((7-106))
---RSDRVAQEIQKEIAVILQREVKDPRIGMVTVSDVEVSSDLSYAKIFVTFLFDHDEMAIEQGMKGLEKASPYIRSLLGKAMRLRIVPEIRFIYDQSLVEGM----------------
General information:
TITO was launched using:
RESULT:
Template:
1JOS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53245 for 600 contacts (-88.7/contact) +
2D Compatibility (PS) -10343 + (NN) -6278 + (LL) 1048
1D Compatibility (HY) -8800 + (ID) 1050
Total energy: -78668.0 ( -131.11 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_1JOS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JOS-query.scw
PDB file :
Tito_Scwrl_1JOS.pdb
: