Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFRKLATSVSLISLLISNALYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPDNKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKNKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLRVPKRSDPNAHTLDKGASIDESKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTNDSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEEEREKKLLAEKEKQETELAKYKLKDLENQKKLKALEAELKKKNTKKPRVVEVPIPPKTSDSDETMRVIKEKENYNGLLVDKETTIKRSYKGTLISENSYSKKTPINLEDLRSLEEEIKSYYVKSNGLCYANGINLYVKIKNDPYKEGMLCGYE--SVQKLLSPLRDKLKYDKQKLQKALLKDLK |
2V78 Chain:A ((75-185)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTSHIKVDNESFTGIYF-----IQRGYPIPMKSELVYYRKGSAGS---RLSPEDINENYVRNSRLVHSTGITLAI---SDNAKEAVIKAFELAKSRSLDTNIRPKLWSSLEKAKETILSILK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13943 for 661 contacts (21.1/contact) +
2D Compatibility (PS) -11228 + (NN) -1198 + (LL) 25404
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: 20971.0 ( 31.73 by residue)
QMean score : ?
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