Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKMNKVVLHKEYSGFVRFFHWVRALSIFTLIATGFYIAYPFLQPNSSFYKGVYLLQAYVRSFHVMFGFLLISALIFRTYLFFTKESLMERRSFSQLLSPKAWIDQMKAYFLISDKPHTKGLYNPIQLVAYFTLVVLIVLMSLSGIVLYYNVYHEGLGAFLANAFKWFEALCGGLANVRFIHHLATWGFILFVPVHVYMVFFHSIRYDSSGADSMINGYGYTKE |
| 1KQF Chain:C ((106-173)) | ---------VGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQY-----FPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI-------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KQF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -39191 for 382 contacts (-102.6/contact) +
2D Compatibility (PS) -6983 + (NN) -3554 + (LL) 9520
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -46608.0 ( -122.01 by residue)
QMean score : 0.218
|
|
|