Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGENFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVWLVNWQKKNF-----AKVKNVDLWKEFVKVSKGHSIVAVWIKGHNGHAENERCNSLAKLEAQKRVKTTT
3AA5 Chain:X ((2-141))
LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAFIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDT
General information:
TITO was launched using:
RESULT:
Template:
3AA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57355 for 1057 contacts (-54.3/contact) +
2D Compatibility (PS) -14450 + (NN) -7629 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 3700
Total energy: -92334.0 ( -87.35 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3AA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AA5-query.scw
PDB file :
Tito_Scwrl_3AA5.pdb
: