Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHHTPMNTPLKLSVQALERYFLGQLFEFDAPLDLIGTFFQKQVWSALMTIPYGKTKSYDEIAKLINNPKSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNERAKNFLIS
4ZYD Chain:A ((10-146))
--------------PLGYITVAKDDKGFIMLDF-CDCVEGNSRDDSSFTEFFHKLDLYFEGKPINLREPINLKTYPFRLSVFKEVMKIPWGKVMTYKQIADSLGT--SPRAVGMALSKNPILLIIPAHRVIAENG-IGGYSRGVKLKRALLELEGVKIP---------
General information:
TITO was launched using:
RESULT:
Template:
4ZYD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76437 for 970 contacts (-78.8/contact) +
2D Compatibility (PS) -14738 + (NN) -4354 + (LL) 1720
1D Compatibility (HY) -12400 + (ID) 2350
Total energy: -108559.0 ( -111.92 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_4ZYD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZYD-query.scw
PDB file :
Tito_Scwrl_4ZYD.pdb
: