Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREAIIKRAAKELKEGMYVNLGIGLPTLVANEVS-GMNIVFQSENGLLGIGAYPLEGGVDADLINAGKETITVVPGASFFNSADSFAMIRGGHIDLAILGGMEVSQNGDLANWMIPKKLIKGMGGAMDLVHGAK-KVIVIMEHCNKYGESKVKKECSLPLTGKGVVHQLITDLAVFEFS-NNAMELVELQEGVSLDQVKEKTEAEFEVHL
3DLX Chain:A ((263-470))
VRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNITVHLQSENGVLGLGPYPRQHEADADLINAGKETVTILPGASFFSSDESFAMIRGGHVDLTMLGAMQVSKYGDLANWMIPGKMVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDKKKGLTLIELWEGLTVDDVQKSTGCDFAVSP
General information:
TITO was launched using:
RESULT:
Template:
3DLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127752 for 1608 contacts (-79.4/contact) +
2D Compatibility (PS) -22069 + (NN) -5355 + (LL) 0
1D Compatibility (HY) -23600 + (ID) 5950
Total energy: -184726.0 ( -114.88 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3DLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DLX-query.scw
PDB file :
Tito_Scwrl_3DLX.pdb
: