Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKALKILSVGALLFVALNAKDFSKT-----SDEDLAKMAGV-VAPQDIVDYT--KELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH
2WJG Chain:A ((106-170))
----LQLMEMGANLLLALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEELKKAISIAVKDK-------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3676 for 290 contacts (-12.7/contact) +
2D Compatibility (PS) -6206 + (NN) -1762 + (LL) 4256
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -12438.0 ( -42.89 by residue)
QMean score : 0.280
(partial model without unconserved sides chains):
PDB file :
Tito_2WJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WJG-query.scw
PDB file :
Tito_Scwrl_2WJG.pdb
: