Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTVIFVAVLQAALGMLSVRQEICRNPSQPHDFKSLVIVTNFY
2Q8T Chain:A ((51-63))
------------------RGHSVCTNPSDKWVQDYIKDM----
General information:
TITO was launched using:
RESULT:
Template:
2Q8T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -467 for 28 contacts (-16.7/contact) +
2D Compatibility (PS) -1368 + (NN) -1987 + (LL) 2484
1D Compatibility (HY) -400 + (ID) 200
Total energy: -1938.0 ( -69.21 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_2Q8T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q8T-query.scw
PDB file :
Tito_Scwrl_2Q8T.pdb
: