Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLKQALSLSQDELETLKNEIDAKVRASD--LNAYIKAPSLNGASAKG----VPILIKDNISVKGWEITCSSKILEGYVAPYHASAIENLHQNGMAGFGLSNMDEFAMGSTTESSCYGITKNPRDKNIVPGGSSGGSAAAVAGGLTVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGVIAYRSSFDQIRPITQNVEDASILFDAISGYDSKDSTSANLKPTHTFINLIRD--KRFKIAILRD-HINDASNEVQLAYENTIKALKEMGHEVVEKKMLDSHYQISIYYIISMAEASSNLARFDGVRYGRRAQNVKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIKEQYNKIFEEVDLIFTPVAPTTAYLFNYHASPLEMYLSDIYTIGANLSGLPALSLPVAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQELDLKLD |
| 3AL0 Chain:A ((9-458)) | -LTIEECLKLSEEEREKLPQLSLETIKRLDPHVKAFISVRENVSVEKKGKFWGIPVAIKDNILTLGMRTTCASRILENYESVFDATVVKKMKEAGFVVVGKANLDEFAMGSSTERSAFFPTRNPWDLERVPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLCGVVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVRDAAILMEIISGRDENDATTVNRK--VDFLSEIEEGVSGMKFAVPEEIYEHDIEEGVSERFEEALKLLERLGAKVERVKIPHIKYSVATYYVIAPAEASSNLARFDGVKYGLRIKE-KGLREMYMKTRNVGFGEEVRRRIMIGTFTLSAAYYEAYFNKAMKVRRKISDELNEVLSQYDAILTPTSPVTAFKIGEIKDPLTYYLMDIFTIPANLAGLPAISVPFGFSN-NLPVGVQVIGRRFADGKVFRIARAIEKNSPYNEN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -169709 for 4270 contacts (-39.7/contact) +
2D Compatibility (PS) -46562 + (NN) -8048 + (LL) 488
1D Compatibility (HY) -36800 + (ID) 10100
Total energy: -270731.0 ( -63.40 by residue)
QMean score : 0.352
|
|
|