Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDANCLKLMFVAGSQDFYHIKGDRTNALLDTLELALQSKITAFQFRQKGDLALQDPVEIKRLALECQKLCKKYGTPFIINDEVRLALELKADGVHVGQEDMAIEEVVTLCQKRLFIGLSVNTLEQALKARHLDHIAYLGVGPIFPTPSKKDAKEVVGVNLLKKIHDSGVEKPLIAIGGITTDNASKLQKFS--GIAVISAITQAKDKALAVEKLLKNA
3O16 Chain:A ((26-224))
------LSVYFIMGSN---NTKAD----PVTVVQKALKGGATLYQFREKGGDALTGEARIK-FAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAIGD-MILGVSAHTMSEVKQAEE-DGADYVGLGPIYPT-----------VSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEI
General information:
TITO was launched using:
RESULT:
Template:
3O16.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169629 for 1521 contacts (-111.5/contact) +
2D Compatibility (PS) -20317 + (NN) -13844 + (LL) 1532
1D Compatibility (HY) -12000 + (ID) 3850
Total energy: -218108.0 ( -143.40 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_3O16.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O16-query.scw
PDB file :
Tito_Scwrl_3O16.pdb
: