Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQKTLLIITDGIGYRKDSDHNAFFHAKKPTYDLMFKTLP-YSLIDTHGLSVGLP-KGQMGNSEVGHMCIGAGRVLYQDLVRISLSLQNDELKNNPAFLNT----IQKSHVVHLMGLMSDGGVHSHIEH-FIALALECEKSHKKVCLHLITDGRDVAPKSALTYLKQMQNICNE------NIQIATISGR-FYAMDR-DNRFERIELAYNS-LMGLNHTPLSPSEYIQS--QYDKNITDEFIIPACFKNYCG-----MQDDESFIFINFRNDRAREIVSALGQKEFNSFKRQAFKKLHIATMTPYDNSFPYP--VLFPKESVQNTLAEVVSQHNLTQSHIAETEKYAHVTFFINGGVETPFKNENRVLIQSPK-VTTYDLKPEMSAKGVTLAVLEQMRLGT-DLIIVNFANGDMVGHTGNFEASIKAVEAVDACLGEILSLAKELDYAMLLTSDHGNCERM----------KDENQN--PLTNHTAGSVYCFVLGNGVK-------SIKNGALNNIASSVLKLMGIKAPATMDEPLF |
3NVL Chain:A ((34-567)) | --RKLVLVVLDGVGIGPRDEYDAVHVAKTPLMDALFNDPKHFRSICAHGTAVGLPTDADMGNSEVGHNALGAGRVVLQGASLVDDALESGEIFTSEGYRYLHGAFSQPGRTLHLIGLLSDGGVHSRDNQVYQILKHAGANGAKRIRVHALYDGRDVPDKTSFKFTDELEEVLAKLREGGCDARIASGGGRMFVTMDRYEADWSIVERGWRAQVLGEGRAFKSAREALTKFREEDANISDQYYPPFVIAGDDGRPIGTIEDGDAVLCFNFRGDRVIEMSRAFEEEEFDKFNRVRLPKVRYAGMMRYDGDLGIPNNFLVPPPKLTRTSEEYLIGSGCNIFALSETQKFGHVTYFWNGNRSGKLSEERETFCEIPSDRVQFNQKPLMKSKEITDAAVDAIKSGKYDMIRINYPNGDMVGHTGDLKATITSLEAVDQSLQRLKEAVDSVNGVFLITADHGNSDDMVQRDKKGKPVRDAEGNLMPLTSHTLAPVPVFIGGAGLDPRVQMRTDLPRAGLANVTATFINLMGFEAPSDYEPSLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -279859 for 4358 contacts (-64.2/contact) +
2D Compatibility (PS) -52378 + (NN) -20345 + (LL) 352
1D Compatibility (HY) -32000 + (ID) 7900
Total energy: -392130.0 ( -89.98 by residue)
QMean score : 0.468
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