Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQKTLLIITDGIGYRKDSDHNAFFHAKKPTYDLMFKTLP-YSLIDTHGLSVGLP-KGQMGNSEVGHMCIGAGRVLYQDLVRISLSLQNDELKNNPAFLNT----IQKSHVVHLMGLMSDGGVHSHIEH-FIALALECEKSHKKVCLHLITDGRDVAPKSALTYLKQMQNICNE------NIQIATISGR-FYAMDR-DNRFERIELAYNS-LMGLNHTPLSPSEYIQS--QYDKNITDEFIIPACFKNYCG-----MQDDESFIFINFRNDRAREIVSALGQKEFNSFKRQAFKKLHIATMTPYDNSFPYP--VLFPKESVQNTLAEVVSQHNLTQSHIAETEKYAHVTFFINGGVETPFKNENRVLIQSPK-VTTYDLKPEMSAKGVTLAVLEQMRLGT-DLIIVNFANGDMVGHTGNFEASIKAVEAVDACLGEILSLAKELDYAMLLTSDHGNCERM----------KDENQN--PLTNHTAGSVYCFVLGNGVK-------SIKNGALNNIASSVLKLMGIKAPATMDEPLF
3NVL Chain:A ((34-567))--RKLVLVVLDGVGIGPRDEYDAVHVAKTPLMDALFNDPKHFRSICAHGTAVGLPTDADMGNSEVGHNALGAGRVVLQGASLVDDALESGEIFTSEGYRYLHGAFSQPGRTLHLIGLLSDGGVHSRDNQVYQILKHAGANGAKRIRVHALYDGRDVPDKTSFKFTDELEEVLAKLREGGCDARIASGGGRMFVTMDRYEADWSIVERGWRAQVLGEGRAFKSAREALTKFREEDANISDQYYPPFVIAGDDGRPIGTIEDGDAVLCFNFRGDRVIEMSRAFEEEEFDKFNRVRLPKVRYAGMMRYDGDLGIPNNFLVPPPKLTRTSEEYLIGSGCNIFALSETQKFGHVTYFWNGNRSGKLSEERETFCEIPSDRVQFNQKPLMKSKEITDAAVDAIKSGKYDMIRINYPNGDMVGHTGDLKATITSLEAVDQSLQRLKEAVDSVNGVFLITADHGNSDDMVQRDKKGKPVRDAEGNLMPLTSHTLAPVPVFIGGAGLDPRVQMRTDLPRAGLANVTATFINLMGFEAPSDYEPSLI


General information:
TITO was launched using:
RESULT:

Template: 3NVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -279859 for 4358 contacts (-64.2/contact) +
2D Compatibility (PS) -52378 + (NN) -20345 + (LL) 352
1D Compatibility (HY) -32000 + (ID) 7900
Total energy: -392130.0 ( -89.98 by residue)
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_3NVL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NVL-query.scw
PDB file : Tito_Scwrl_3NVL.pdb: