Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFMRKSYRAVSVDSVTIKSIKAKLGKNHYHKVSGSHQVGGAHKVISSFNTKNPFFIRQHLKSH
2EFQ Chain:A ((58-78))
---------SLNLDYIVITSVKAKYGKNYHVELGNKLAQIPGVWGVYFVLGDNDFIVMARYKTR
General information:
TITO was launched using:
RESULT:
Template:
2EFQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -675 for 53 contacts (-12.7/contact) +
2D Compatibility (PS) -2233 + (NN) 963 + (LL) 1020
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -3375.0 ( -63.68 by residue)
QMean score : 0.109
(partial model without unconserved sides chains):
PDB file :
Tito_2EFQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EFQ-query.scw
PDB file :
Tito_Scwrl_2EFQ.pdb
: