Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTETDNFNKQDKHKLDYRKINYESKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQNPKHKRTWWSLWLYKKPSDDALDIKVLDVFDDGKYTYFRYDRDQAFSKFPYTYKVVDGYDNPINSRVVGNYIIAEDISKKWTLRSGKEYVCVRRDKRKYQKSRDFMRLKRLLEQDEAMKAKRNNMHLIEDTTPQPKNAISVTELLAQIKNQTPSKECRALNEEEVKTLEEVKNIIKTPKPLQKDLKKNAKKHTIKTQYCVPIPYIERLKTTDGLEKHQKGLNNTKKQIQANPIEEIKENKK |
3FUY Chain:A ((32-57)) | ------------------------------------------------------------------------------PSLVTIRDFDNGQFAVLRIGRT----GFPADKGDIDLCLDKMKGVRDAQQSIGDDTEFGFKGPHIRIRCVDIDDKHTYNAMVYVDLIVGTGASEVERETAEELAKEKLRAALQVDIADEHSCVTQFEMKLREELLSSDSFHPDKDEYYKDFL-------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2913 for 105 contacts (-27.7/contact) +
2D Compatibility (PS) -3025 + (NN) -2350 + (LL) 9728
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -510.0 ( -4.86 by residue)
QMean score : 0.405
|
|
|