Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFELTKKTKFDGEMIGYTEELLTFLVRDFFNGIFKSKVIPKMPIFCGDVKC--EDFNALRSLVYLSVLELEETINPNKIPF
2IG3 Chain:A ((9-47))
--------------------ESIAKLMEIFYEKVRKDKDLG--PIFNNAIGTSDEEWKEHKAKIGNFWAGMLLGEGDYNGQP
General information:
TITO was launched using:
RESULT:
Template:
2IG3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19264 for 180 contacts (-107.0/contact) +
2D Compatibility (PS) -3449 + (NN) 768 + (LL) 1872
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -22123.0 ( -122.91 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_2IG3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IG3-query.scw
PDB file :
Tito_Scwrl_2IG3.pdb
: