Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLINAVIEKD-ENGYFAFVPFLKGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKKNSVIAPIEIAFA
2YZT Chain:A ((3-63))
RRYRVVVERDEEGYFVAHVPELH-AHTQAQSFEELLRRLQEAIAVSLEEERAEVVGLEGALEIEAA-------
General information:
TITO was launched using:
RESULT:
Template:
2YZT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27150 for 345 contacts (-78.7/contact) +
2D Compatibility (PS) -6458 + (NN) -1654 + (LL) 508
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -38104.0 ( -110.45 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_2YZT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YZT-query.scw
PDB file :
Tito_Scwrl_2YZT.pdb
: