Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDKIRQVLPFHSGEILHPKIVKEIMENTLK
3UI3 Chain:A ((82-99))
----AYDDLRQELELLGFEWTQGSVYVNYSKENTLAQVYKAINKLSQIEWFKKSVRDIRAF
General information:
TITO was launched using:
RESULT:
Template:
3UI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1544 for 68 contacts (-22.7/contact) +
2D Compatibility (PS) -2168 + (NN) -2412 + (LL) 344
1D Compatibility (HY) 0 + (ID) 150
Total energy: -5930.0 ( -87.21 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_3UI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UI3-query.scw
PDB file :
Tito_Scwrl_3UI3.pdb
: