Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNG---ITPELMAQMTSFIFEVVEKLGIKEKGYKLLTNVGKNAGQEVMHLHFHILSGDKH
1RZY Chain:A ((17-118))
-TIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLK-KGYRMVVNEGSDGGQSVYHVHLHVLGGRQM
General information:
TITO was launched using:
RESULT:
Template:
1RZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79769 for 691 contacts (-115.4/contact) +
2D Compatibility (PS) -10749 + (NN) -4962 + (LL) 312
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -106718.0 ( -154.44 by residue)
QMean score : 0.750
(partial model without unconserved sides chains):
PDB file :
Tito_1RZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RZY-query.scw
PDB file :
Tito_Scwrl_1RZY.pdb
: