Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDTLFNESLNKRFCFDEKVAHVFDDMLERSIPYYHEMLNLGAYFIAQNLKENVYHKSLPKPLIYDLGCSTGNFFIALNQQIQQDIELVGID---NSMPMLKKAQEKLKDFNNVRFECMDFLEVKFKEASAFSLLFVLQFVRPMQREVLLKKIYNSLALNGVLLVGEKIMSEDRILDKQMIELYYLYKQNQGYSHNEIAFKREALENVLVPYSLKENIALLESVGFKHVEALFKWVNFTLLVARKT
3E7P Chain:A ((48-158))
------------------------------------------------------------KSLIADLGCGTGGQTMILAQHVPGKI--TGIDFFPGFIERFNKNAEKLNLQNRVKGIVGSMDDLSF-EKDSLDLIWSEGAIYNIGFERGLKEWRNYLKPGGYLAVSESVWFTDQRPAEIHDFWMSAYTEIDTVPNKVAQIQKAGYIPVATFILPENCWIEHYFAPQAKAEEIFRRKHAGSRIVEEL
General information:
TITO was launched using:
RESULT:
Template:
3E7P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92697 for 792 contacts (-117.0/contact) +
2D Compatibility (PS) -11568 + (NN) -4017 + (LL) 4804
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -110778.0 ( -139.87 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_3E7P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E7P-query.scw
PDB file :
Tito_Scwrl_3E7P.pdb
: