Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDKRIKTLLLFFGLNMVCLSVSFTNKPHLCFWFLVLGCYLVYEWQKKQKKDFQSAKSLKFDSVSELEKDLNMEVTNDEWDTIKKLNEKLKMFFNVENAIYVFLLVSYLIVGMRVTLSLIDNHGVLK |
4XM5 Chain:A ((141-185)) | --------------------------------------------WKNDKFNVSQ------NNYTVSLSQDALTEINNDTIDDIMDVNEKNMELVQNLYSTTLAEKTKTLLLYKEKIDTGINTCQFCN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5436 for 128 contacts (42.5/contact) +
2D Compatibility (PS) -3949 + (NN) -798 + (LL) 4476
1D Compatibility (HY) -400 + (ID) 600
Total energy: 4165.0 ( 32.54 by residue)
QMean score : 0.431
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