Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKSAIFVLSGFLAFLLYALLLYGLLLERHNKEAEKILLDLN--KKDEQAIDLNLEDLPSEKKNEKIEKVTE---------KQGDFLEPKEEPKE--------EPEESLEDIFSSLNDFQEKTDK----NAQKDEQKNEQEEQR----RLREQQRLKQNQENQEMLKGLQQNLNQFTQKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWRGVFYHKASVSVLIMITKDGEFDYTILSYSDFKDYNKSVMTLLDDLKKVDFPPYPGGNMISIKVNFTTKEEQ |
5A5T Chain:A ((496-606)) | ---------------------------------------DLNYATREDAPIGPHLQSMPSEQIRNQLTAMSSVLAKALEVIKPAHILQEKEEQHQLAVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRK-------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5A5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 47463 for 382 contacts (124.2/contact) +
2D Compatibility (PS) -9093 + (NN) -2051 + (LL) 13976
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: 46445.0 ( 121.58 by residue)
QMean score : 0.512
|
|
|