Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIDNQTPLESDFLLLEKIADVLASTQIIELVLVSDETMREINRDLRDCDYATDVLSFPLEAIPHTPLGSVVINAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDKGEQRQKEGELIKAFDLPLSLIERTQEC
2D3D Chain:A ((22-53))
--------PMWLKSLRLHKYSDALSGTPWIELIYLDDETLEKKGVLALGARRKLLKAFGIVIDYKERDLIDRSAY------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2D3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6067 for 147 contacts (-41.3/contact) +
2D Compatibility (PS) -3114 + (NN) 1447 + (LL) 5564
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -6420.0 ( -43.67 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_2D3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D3D-query.scw
PDB file :
Tito_Scwrl_2D3D.pdb
: