Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNFYDWIKEFVRDQGEFIAQQSGWLELERSSYAKLIAQTISHVLNGGSLLVSADSSRRWFLNYILSNLNPKDLKERPLLSVIDFNASSFYPKNDANLSLATIELTYQNPMFWHVGRVENEGLKTLLLSKIPSFLWLFEELKEDCLLLKEHDSLLDYKLLQLFKLFENALFSALYNKVAL |
2O8F Chain:A ((26-98)) | -------------------------------------------------------------------------MPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMGPAGAKNLQSVVLSKMN-----FESFVKDLLLVRQYRVEVYKNRAGSKENDWYLAYKASPGNLSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7864 for 453 contacts (-17.4/contact) +
2D Compatibility (PS) -7672 + (NN) -2428 + (LL) 5712
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -18402.0 ( -40.62 by residue)
QMean score : 0.199
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