Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFGVFGNPIKHSKSPLIHNACFLTFQKELGFLGHYHPILLPLESRIKNEFLHLGLSGANVTLPFKERAFQICDKIKGIALECASVNTLVLENDELVGYNTDALGFYLSLKHQNYQNDQNALILGAGGSAKALACGLQKQGLKVSVLNRSARGLDFFQRLGCDCFMEPPKSAFDLIINATSASLHNELPLNKEVLKGYFKESKLAYDLAYGFLTPFLSLAKELKIPFQDGKDMLIYQASLSFEKFSDSQIPYSKAFEVMRSVF
4FR5 Chain:A ((1-263))
MKLKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLKQKNYQN---ALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPKSAFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLASGFLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFSASQIPYSKAFEVMRSVF
General information:
TITO was launched using:
RESULT:
Template:
4FR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -195965 for 2346 contacts (-83.5/contact) +
2D Compatibility (PS) -27456 + (NN) -7095 + (LL) -36
1D Compatibility (HY) -39600 + (ID) 12300
Total energy: -282452.0 ( -120.40 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_4FR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FR5-query.scw
PDB file :
Tito_Scwrl_4FR5.pdb
: