Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQAIYNETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVRNTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV
1DD5 Chain:A ((2-183))
-VNPFIKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISEERTLVIKPWDKSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEIKKEEIMEF
General information:
TITO was launched using:
RESULT:
Template:
1DD5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33288 for 1285 contacts (-25.9/contact) +
2D Compatibility (PS) -19633 + (NN) -6768 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 3600
Total energy: -77081.0 ( -59.99 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1DD5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DD5-query.scw
PDB file :
Tito_Scwrl_1DD5.pdb
: