Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHDFLKAFKDAFPHTISIFLGYLLMGMTFGMLLAQQGYDYKVALFMSLFIYAGAIQFVAITLLSAQASLMNVVIVSLLVNARQTCYALSMLDRFKNTKWRLPYLAHALTDETFALLNLYAPKKGVNETDFMFSISLLNHSYWIFGSLVGSLVGSHFSFDTQGMEFVMTAIFIVLFMEQYKRNTNHKNAWLGIAIAVVCLALFGTEYFLLIALVLMVLALILFRKQLEC |
| 3WU2 Chain:J ((9-24)) | -------------------------------------------------------------------------------------------------------------------------------------------PLWIVATVAGMGVIVIVGLFFYGAYAGLGSSL--------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WU2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2807 for 56 contacts (-50.1/contact) +
2D Compatibility (PS) -1591 + (NN) 621 + (LL) 18620
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 13043.0 ( 232.91 by residue)
QMean score : -0.284
|
|
|