Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHVFEVYPKVNVFLKIL-HKEGAYHKIISRMCLVKNKLKDIISVKNALSFSLK----GDFDCPLEENSL-FKALQVLKKFLVQKNFSHSVIKSLDTLAIEVEKNIPTQAGLGGGSADAGGLLYHLNQMFDWRLSLKELYTMGSLVGADTNFFISQYKSANATSYGEVIENFEEESLEDRLEIYAPNHVFCSTKAVYQAYKPETCFFQAKEWLKKTSLECLKTYDRNELNDLLKPALRTNPALKDIESQLSKEWFFSGSGSAFFRLKNTQKGANETHCQQ |
| 3PYF Chain:A ((8-157)) | ----VRVPGKVNLYLAVGDRREDGYHELTTVFHAVS--LVDEVTVRNADVLSLELVGEGADQLPTDERNLAWQAAELMAEH---------VGRAPD-VSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFAL-HGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82600 for 1092 contacts (-75.6/contact) +
2D Compatibility (PS) -15250 + (NN) -3116 + (LL) 1096
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -110470.0 ( -101.16 by residue)
QMean score : 0.324
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