Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMG-PVILENVTQMSQVPL-DVHLMVENASFFVELFAPLNPQIISIHAENEKHPHRVLQLIKSSGITPGIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKNIFELQQAGVDVVVSGSYIFESKDRKLAIEGLQNVRQPLA
3OVQ Chain:A ((6-216))
-KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV----HWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAA
General information:
TITO was launched using:
RESULT:
Template:
3OVQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134160 for 1755 contacts (-76.4/contact) +
2D Compatibility (PS) -22582 + (NN) -11761 + (LL) 704
1D Compatibility (HY) -18000 + (ID) 3800
Total energy: -189599.0 ( -108.03 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_3OVQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OVQ-query.scw
PDB file :
Tito_Scwrl_3OVQ.pdb
: