Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LATGIGTAKMILCGEHAVVYGEPAISVPFTQAVVTTNVETSIKTKFSSAFFSGDLDDMPDFLAGIKALVVDVLNEIGNGECVSIHVVSGVPIGRGLGSSAAVATSIARGLYKYFNQELDSKKLLAIVNAAEKIAHGNASGV-DAITVV--SEKPVWYERDRKL--EIMHFPKKITFVVADTGVPSETRD---------AVKDVQVLYKENQVEI--GKI-----IHQ--LGDISREIKTHLE-----GDADTVKIGAAMNKAQSYL-ETLTVSDSSLEKLIKVARSNGADGAKLTGGGRGGCIIAVAKNQE---IAEQITKALHNAGAAQEWIFTIGEGSYESDSHRTHECGAN |
| 2DEJ Chain:A ((69-327)) | -----------------------------------------------------------DYVKGIFWVLKESDYEVGG---IKGRVSGNLPLGAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGNVIFLDTHTLDYEYIPFPKDVSILVFYTGVR----SSEYAERKHIAEESLKILGKGSSKEVREGELSKLPPLHRKFFGYIVRENARVLEVRDALKEGNVEEVGKILTTAHWDLAKNYEVSCKELDFFVERALKLGAYGARLTGAGFGGSAIALVDKEDAETIGEEILR--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DEJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75398 for 1550 contacts (-48.6/contact) +
2D Compatibility (PS) -23974 + (NN) -14595 + (LL) 5576
1D Compatibility (HY) -15600 + (ID) 3600
Total energy: -127591.0 ( -82.32 by residue)
QMean score : 0.485
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