Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMANTKTEQDFEKVLKRRDL--IAANFRWLFASQICWNYERMMSTGYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNTNPMVGGLILGMDMAIEEREKKASKEVVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAYMGLQGNVTGVVIWVLVNILVVGARFTLLPLGYKQGAKLVTEFADRLNALTDAAILLGVTVVGALIPTVIKATVPFVYKSGKVELKMQDMLDQIMPSLVPVLLVALIYALLGHKKMTSTKAILLVMVIAIILFNLKILG |
1S0D Chain:A ((796-856)) | ----------DFDNTLKKNLLNYIDENKLYLIGSA---EYEKSKVNKYLKTIMPFDLSIYTNDTILIEMFNKYN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9768 for 280 contacts (34.9/contact) +
2D Compatibility (PS) -6343 + (NN) -1853 + (LL) 18728
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: 15250.0 ( 54.46 by residue)
QMean score : -0.012
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