Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISHFEPVTVVASSSQ-------YVNARYMLSDEIRVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNL--EKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVIFPLFGDPN-DELAREKLQQLYPNCEVVGVKAREIL--LGGGNIHCITQQVPR |
5AK7 Chain:A ((44-310)) | -----------------------------------------------------------ITIVASESQKNTVITQYTQSGVNLSN-CDFIIAKTDSYWTRDYTGWFAMYDTNKVGLVDFIYNR----------PRPNDDEFPKYEAQYLGIEMFGM-KLKQTGGNYMTDGYGSAVQSH---IAYTENSSLSQAQVNQKMKDYLGITHHDVVQDPNGEYIN----HVDCWGKYLAPNKILIRKVPDN-HPQHQALEDMAAYFAAQTCAWGTKYEVYR------ALATNEQ---------------------PYTNSLILNNRVFVPVNGPASVDNDALNVYKTAMPGYEIIGVKGASGTPWLGTDALHCRTHEV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74439 for 1971 contacts (-37.8/contact) +
2D Compatibility (PS) -27572 + (NN) -10625 + (LL) 5100
1D Compatibility (HY) -11600 + (ID) 3650
Total energy: -122786.0 ( -62.30 by residue)
QMean score : 0.410
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