Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGGRRGGRRRKKVCYFTSNGITHIDYKDVELLKKFVSERGKILPRRVTGTSAKYQRKLTVAIKRSRQMALLPFVAEEK
2UXB Chain:R ((33-82))
-------------------------DYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFT----
General information:
TITO was launched using:
RESULT:
Template:
2UXB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9456 for 281 contacts (-33.7/contact) +
2D Compatibility (PS) -5324 + (NN) -3054 + (LL) 1456
1D Compatibility (HY) -4000 + (ID) 1550
Total energy: -21928.0 ( -78.04 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_2UXB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UXB-query.scw
PDB file :
Tito_Scwrl_2UXB.pdb
: