Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNMNKSVGKFLSRKLEEQSMKVADSSMSKACFMFVYEPKSPFVKMQEKNENK
2JAK Chain:A ((323-348))
---IMEPLFRQLAKCVSSPHFQVAERALY------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JAK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5775 for 117 contacts (49.4/contact) +
2D Compatibility (PS) -2612 + (NN) -490 + (LL) 1964
1D Compatibility (HY) -2400 + (ID) 150
Total energy: 2087.0 ( 17.84 by residue)
QMean score : 0.075
(partial model without unconserved sides chains):
PDB file :
Tito_2JAK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JAK-query.scw
PDB file :
Tito_Scwrl_2JAK.pdb
: