Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VDNNFQDRTPPQNIEAEQAVLGAIFLEPNALITASEILMPDDFYRTGHQIIFETMLDLNDHGKAVDVLTVYEALAAKGNLEDAGGLPYLTELSGAVPTAANLEYYAHIIEDKALLRRLIRTATQIATDGYSREDELDMLMDEAEKSILEVSQRKNVGAFKNIKDVLVKTYDDIEILHNRKG--DITGIPTGFNELDKMTAGFQRNDLIIVAARPSVGKTAFALNIAQNVATKTDENVAIFSLEMGAEQLVMRMLCAEGNINAQNLRTGALTSDDWQKLTIAMGTLSNSGIYIDDTPGVRVNEIRSKCRRLK-QETGLGMIVIDYLQLIAGSGRGGENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYREDYYDREGEN-------------------------------DGTI---EIIIAKQRNGPVGDVKLAFVKEYNKFVNLEVRYDDAMA |
4A1F Chain:A ((2-319)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------RNIKEVLESAMDLI-TENQRKGSLEVTGIPTGFVQLDNYTSGFNKGSLVIIGARPSMGKTSLMMNMVLS-ALNDDRGVAVFSLEMSAEQLALRALSDLTSINMHDLESGRLDDDQWENLAKCFDHLSQKKLFFYDKSYVRIEQIRLQLRKLKSQHKELGIAFIDYLQLMSGS-KATKERHEQIAEISRELKTLARELEIPIIALVQLNRSLENRDDKRPILSDIKDSGGIEQDADIVLFLYRGYIYQMRAEDNKIDKLKKEGKIEEAQELYLKVNEERRIHKQNGSIEEAEIIVAKNRNGATGTVYTRFNAPFTRYEDMPI------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134578 for 2212 contacts (-60.8/contact) +
2D Compatibility (PS) -30729 + (NN) -12005 + (LL) 12360
1D Compatibility (HY) -28000 + (ID) 6750
Total energy: -199702.0 ( -90.28 by residue)
QMean score : 0.467
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