Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVDNNFQDRTPPQNIEAEQAVLGAIFLEPNALITASEILMPDDFYRTGHQIIFETMLDLNDHGKAVDVLTVYEALAAKGNLEDAGGLPYLTELSGAVPTAANLEYYAHIIEDKALLRRLIRTATQIATDGYSREDELDMLMDEAEKSILEVSQRKNVGAFKNIKDVLVKTYDDIEILHNRKG--DITGIPTGFNELDKMTAGFQRNDLIIVAARPSVGKTAFALNIAQNVATKTDENVAIFSLEMGAEQLVMRMLCAEGNINAQNLRTGALTSDDWQKLTIAMGTLSNSGIYIDDTPGVRVNEIRSKCRRLK-QETGLGMIVIDYLQLIAGSGRGGENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYREDYYDREGEN-------------------------------DGTI---EIIIAKQRNGPVGDVKLAFVKEYNKFVNLEVRYDDAMA
4A1F Chain:A ((2-319))---------------------------------------------------------------------------------------------------------------------------------------------------------------RNIKEVLESAMDLI-TENQRKGSLEVTGIPTGFVQLDNYTSGFNKGSLVIIGARPSMGKTSLMMNMVLS-ALNDDRGVAVFSLEMSAEQLALRALSDLTSINMHDLESGRLDDDQWENLAKCFDHLSQKKLFFYDKSYVRIEQIRLQLRKLKSQHKELGIAFIDYLQLMSGS-KATKERHEQIAEISRELKTLARELEIPIIALVQLNRSLENRDDKRPILSDIKDSGGIEQDADIVLFLYRGYIYQMRAEDNKIDKLKKEGKIEEAQELYLKVNEERRIHKQNGSIEEAEIIVAKNRNGATGTVYTRFNAPFTRYEDMPI-------


General information:
TITO was launched using:
RESULT:

Template: 4A1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134578 for 2212 contacts (-60.8/contact) +
2D Compatibility (PS) -30729 + (NN) -12005 + (LL) 12360
1D Compatibility (HY) -28000 + (ID) 6750
Total energy: -199702.0 ( -90.28 by residue)
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_4A1F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A1F-query.scw
PDB file : Tito_Scwrl_4A1F.pdb: