Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGQIRMSPSELRDRAKTYGQSGRDIEDILSRLSQLQEQLRSEWEGQAFMRFDDQFEQLKPKVTEFANLMDQINDQLEKTANAVEEHDQQLSQNFGF
4J41 Chain:A ((5-89))
--AEIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQYIAILEGISTDLKRIADKFRNT----------
General information:
TITO was launched using:
RESULT:
Template:
4J41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3204 for 477 contacts (-6.7/contact) +
2D Compatibility (PS) -9061 + (NN) -683 + (LL) 624
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -17574.0 ( -36.84 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_4J41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J41-query.scw
PDB file :
Tito_Scwrl_4J41.pdb
: