Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDR----------EYLKQNPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLIS--GYD----INRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKNGVSVFECGGKDNFDNGNGAIMRIMPLVFYLGKDFSFGKKNKITEEVTRITH-AHPRSILGSYVYIELLQNLFAN---MDKKLAY-EEMQNYIRK-------NYSDYPFKDELQYYNNILEGNLYELKE--SNIKSSGYVVDTLEASIWAFL-----------TTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
| 2QTY Chain:A ((6-323)) | -------------------RFRGCLAGALLGDCVGAVYEAHDTVSLASVLSHVESLEP--------------ETLYYTDDTAMTRALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVITVFK-KLLNPKCRDVYEPARAQFN--GKGSY--GNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQALAVHLALQGVSSSEHFLEQLLGHMEELEGDAQSVLDAKELGMEERPYSSRLKKVGELLDQDVVSREEVVSELGNGIAAFESVPTAIYCFLRCMEPHPEIPSTFNSLQRTLIYSISLGGDTDTIATMAGAIAGAYYGMEQVPESW------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114360 for 2420 contacts (-47.3/contact) +
2D Compatibility (PS) -27605 + (NN) -5289 + (LL) 4800
1D Compatibility (HY) -14000 + (ID) 3650
Total energy: -160104.0 ( -66.16 by residue)
QMean score : 0.305
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