Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEVDKSTIGEVEGVTFQSYFLIKNMLHTRVVGDLEKRLPVTLEKMVEYVESN-RKEII-TPIFIVLNYVGNVPYVDVYVGIDPYDE
3GK6 Chain:A ((114-170))
------------------------KYVTFSATGEMPQVVIDLWNEVWNYFA--CPHKRAYTTDFEYYKSA---NTVEISIAVR----
General information:
TITO was launched using:
RESULT:
Template:
3GK6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35739 for 298 contacts (-119.9/contact) +
2D Compatibility (PS) -5724 + (NN) -1059 + (LL) 1836
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -42936.0 ( -144.08 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_3GK6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GK6-query.scw
PDB file :
Tito_Scwrl_3GK6.pdb
: