Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKLPPEADYLNDETLEVYENDKKKYDQTNQLITNNSVTILLGDFCYYESAWSSRWRDNRFWIGSKVS
2ONU Chain:A ((113-143))
---PNPSDPLNSDAASLLMKDKNIYEEKVKEYVK---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ONU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11916 for 155 contacts (76.9/contact) +
2D Compatibility (PS) -3430 + (NN) -1957 + (LL) 2388
1D Compatibility (HY) -800 + (ID) 350
Total energy: 7767.0 ( 50.11 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_2ONU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ONU-query.scw
PDB file :
Tito_Scwrl_2ONU.pdb
: