Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSSYAIAE-SLGAVDGEHLTFDEMFSVISRIAENVSLPLTVDIETGYARNLEELAQNVERLLAIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIKTIKETAAKMSTEIFINARTDVFFQGRDEAVDLVEEAISRANAYKEAGADAIFIPGLLSPNLIRAFVEKSPLPV--NVMRMDG--MLSNEDLQKIGVKRISYGPFSFFQANLAIQQEVERIFEGGKAL
1O5Q Chain:A ((21-253))
----------------PLQIVGAINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCPLPLLVDADIGFGSSAFNVARTVKSIAKAGAAALHIEDQ-V-----AIVSKEEMVDRIRAAVD--ARTDPNFVIMARTDAL------AVEGLEAALDRAQAYVDAGADMLFPEAITELSMYRRFADVAQVPILANITEFGATPLFTTDELRSAHVAMALY-PLSAFR---AMNRAAEKVY------
General information:
TITO was launched using:
RESULT:
Template:
1O5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128381 for 1769 contacts (-72.6/contact) +
2D Compatibility (PS) -23894 + (NN) -8053 + (LL) 1772
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -173006.0 ( -97.80 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1O5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5Q-query.scw
PDB file :
Tito_Scwrl_1O5Q.pdb
: